Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Col5a2Q3U962 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.82■■□□□ 1.88
Col5a2Q3U962 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Col5a2Q3U962 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Col5a2Q3U962 Gm12922-201ENSMUST00000120626 809 ntBASIC26.81■■□□□ 1.88
Col5a2Q3U962 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col5a2Q3U962 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Col5a2Q3U962 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col5a2Q3U962 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col5a2Q3U962 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.81■■□□□ 1.88
Col5a2Q3U962 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col5a2Q3U962 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Col5a2Q3U962 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col5a2Q3U962 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col5a2Q3U962 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.79■■□□□ 1.88
Col5a2Q3U962 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.79■■□□□ 1.88
Col5a2Q3U962 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col5a2Q3U962 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col5a2Q3U962 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Col5a2Q3U962 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Col5a2Q3U962 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Col5a2Q3U962 Gm5297-201ENSMUST00000198555 1171 ntBASIC26.76■■□□□ 1.87
Col5a2Q3U962 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.76■■□□□ 1.87
Col5a2Q3U962 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Col5a2Q3U962 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col5a2Q3U962 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col5a2Q3U962 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.75■■□□□ 1.87
Col5a2Q3U962 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.74■■□□□ 1.87
Col5a2Q3U962 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.74■■□□□ 1.87
Col5a2Q3U962 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.74■■□□□ 1.87
Col5a2Q3U962 Gm40881-201ENSMUST00000223397 166 ntBASIC26.74■■□□□ 1.87
Col5a2Q3U962 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Col5a2Q3U962 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col5a2Q3U962 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.72■■□□□ 1.87
Col5a2Q3U962 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col5a2Q3U962 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Col5a2Q3U962 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col5a2Q3U962 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Col5a2Q3U962 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col5a2Q3U962 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col5a2Q3U962 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col5a2Q3U962 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Col5a2Q3U962 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Col5a2Q3U962 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col5a2Q3U962 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Col5a2Q3U962 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.68■■□□□ 1.86
Col5a2Q3U962 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col5a2Q3U962 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.68■■□□□ 1.86
Col5a2Q3U962 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Col5a2Q3U962 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.67■■□□□ 1.86
Col5a2Q3U962 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col5a2Q3U962 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.67■■□□□ 1.86
Col5a2Q3U962 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
Col5a2Q3U962 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.67■■□□□ 1.86
Col5a2Q3U962 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.66■■□□□ 1.86
Col5a2Q3U962 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col5a2Q3U962 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Col5a2Q3U962 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC26.65■■□□□ 1.86
Col5a2Q3U962 Appbp2os-202ENSMUST00000206972 447 ntBASIC26.65■■□□□ 1.86
Col5a2Q3U962 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Col5a2Q3U962 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Col5a2Q3U962 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Col5a2Q3U962 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col5a2Q3U962 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col5a2Q3U962 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Col5a2Q3U962 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
Col5a2Q3U962 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Col5a2Q3U962 Gm27454-201ENSMUST00000185090 204 ntBASIC26.63■■□□□ 1.85
Col5a2Q3U962 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Col5a2Q3U962 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col5a2Q3U962 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
Col5a2Q3U962 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Col5a2Q3U962 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col5a2Q3U962 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col5a2Q3U962 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
Col5a2Q3U962 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.61■■□□□ 1.85
Col5a2Q3U962 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col5a2Q3U962 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Col5a2Q3U962 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Col5a2Q3U962 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col5a2Q3U962 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col5a2Q3U962 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Col5a2Q3U962 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Col5a2Q3U962 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.59■■□□□ 1.85
Col5a2Q3U962 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col5a2Q3U962 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Col5a2Q3U962 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.58■■□□□ 1.85
Col5a2Q3U962 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Col5a2Q3U962 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col5a2Q3U962 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.57■■□□□ 1.84
Col5a2Q3U962 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col5a2Q3U962 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Col5a2Q3U962 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col5a2Q3U962 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col5a2Q3U962 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Col5a2Q3U962 Gm12821-201ENSMUST00000120022 600 ntBASIC26.56■■□□□ 1.84
Col5a2Q3U962 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col5a2Q3U962 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.56■■□□□ 1.84
Col5a2Q3U962 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.56■■□□□ 1.84
Col5a2Q3U962 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms