Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC12,41□□□□□ -0,42
Ush2AQ2QI47 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12,41□□□□□ -0,42
Ush2AQ2QI47 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12,41□□□□□ -0,42
Ush2AQ2QI47 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12,4□□□□□ -0,42
Ush2AQ2QI47 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12,4□□□□□ -0,42
Ush2AQ2QI47 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12,4□□□□□ -0,42
Ush2AQ2QI47 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12,4□□□□□ -0,42
Ush2AQ2QI47 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12,4□□□□□ -0,43
Ush2AQ2QI47 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Gm6139-201ENSMUST00000079261 882 ntBASIC12,39□□□□□ -0,43
Ush2AQ2QI47 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Gm27405-201ENSMUST00000184201 112 ntBASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Gm40881-201ENSMUST00000223397 166 ntBASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC12,38□□□□□ -0,43
Ush2AQ2QI47 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12,37□□□□□ -0,43
Ush2AQ2QI47 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12,37□□□□□ -0,43
Ush2AQ2QI47 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12,37□□□□□ -0,43
Ush2AQ2QI47 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12,37□□□□□ -0,43
Ush2AQ2QI47 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC12,37□□□□□ -0,43
Ush2AQ2QI47 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12,36□□□□□ -0,43
Ush2AQ2QI47 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12,36□□□□□ -0,43
Ush2AQ2QI47 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12,36□□□□□ -0,43
Ush2AQ2QI47 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12,36□□□□□ -0,43
Ush2AQ2QI47 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12,36□□□□□ -0,43
Ush2AQ2QI47 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12,36□□□□□ -0,43
Ush2AQ2QI47 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12,36□□□□□ -0,43
Ush2AQ2QI47 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12,36□□□□□ -0,43
Ush2AQ2QI47 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12,35□□□□□ -0,43
Ush2AQ2QI47 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12,35□□□□□ -0,43
Ush2AQ2QI47 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC12,35□□□□□ -0,43
Ush2AQ2QI47 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC12,35□□□□□ -0,43
Ush2AQ2QI47 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC12,35□□□□□ -0,43
Ush2AQ2QI47 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12,35□□□□□ -0,43
Ush2AQ2QI47 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Gm27801-201ENSMUST00000184174 223 ntBASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC12,34□□□□□ -0,43
Ush2AQ2QI47 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12,33□□□□□ -0,44
Ush2AQ2QI47 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12,32□□□□□ -0,44
Ush2AQ2QI47 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC12,31□□□□□ -0,44
Ush2AQ2QI47 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC12,3□□□□□ -0,44
Ush2AQ2QI47 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC12,3□□□□□ -0,44
Ush2AQ2QI47 Gm26833-201ENSMUST00000180899 440 ntBASIC12,3□□□□□ -0,44
Ush2AQ2QI47 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC12,3□□□□□ -0,44
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms