Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Xrn1P97789 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC32.49■■■□□ 2.79
Xrn1P97789 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Xrn1P97789 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Xrn1P97789 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC32.48■■■□□ 2.79
Xrn1P97789 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Xrn1P97789 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Xrn1P97789 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Xrn1P97789 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Xrn1P97789 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Xrn1P97789 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Xrn1P97789 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Xrn1P97789 Nsd1-206ENSMUST00000224918 1001 ntBASIC32.46■■■□□ 2.79
Xrn1P97789 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Xrn1P97789 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Xrn1P97789 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.45■■■□□ 2.78
Xrn1P97789 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Xrn1P97789 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Xrn1P97789 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC32.44■■■□□ 2.78
Xrn1P97789 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC32.44■■■□□ 2.78
Xrn1P97789 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.44■■■□□ 2.78
Xrn1P97789 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Xrn1P97789 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Xrn1P97789 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC32.43■■■□□ 2.78
Xrn1P97789 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC32.43■■■□□ 2.78
Xrn1P97789 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC32.43■■■□□ 2.78
Xrn1P97789 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC32.41■■■□□ 2.78
Xrn1P97789 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
Xrn1P97789 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Xrn1P97789 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Xrn1P97789 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Xrn1P97789 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Xrn1P97789 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC32.39■■■□□ 2.78
Xrn1P97789 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Xrn1P97789 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
Xrn1P97789 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.37■■■□□ 2.77
Xrn1P97789 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC32.37■■■□□ 2.77
Xrn1P97789 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC32.36■■■□□ 2.77
Xrn1P97789 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Xrn1P97789 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Xrn1P97789 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC32.34■■■□□ 2.77
Xrn1P97789 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Xrn1P97789 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Xrn1P97789 Gm22238-201ENSMUST00000175222 88 ntBASIC32.33■■■□□ 2.77
Xrn1P97789 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Xrn1P97789 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC32.32■■■□□ 2.76
Xrn1P97789 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Xrn1P97789 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Xrn1P97789 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Xrn1P97789 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC32.3■■■□□ 2.76
Xrn1P97789 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Xrn1P97789 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Xrn1P97789 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
Xrn1P97789 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
Xrn1P97789 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Xrn1P97789 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Xrn1P97789 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Xrn1P97789 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
Xrn1P97789 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Xrn1P97789 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Xrn1P97789 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Xrn1P97789 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Xrn1P97789 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Xrn1P97789 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
Xrn1P97789 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC32.26■■■□□ 2.75
Xrn1P97789 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Xrn1P97789 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Xrn1P97789 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.25■■■□□ 2.75
Xrn1P97789 AC117245.4-201ENSMUST00000217388 1646 ntBASIC32.25■■■□□ 2.75
Xrn1P97789 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC32.25■■■□□ 2.75
Xrn1P97789 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC32.25■■■□□ 2.75
Xrn1P97789 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Xrn1P97789 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Xrn1P97789 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC32.24■■■□□ 2.75
Xrn1P97789 Gm13241-201ENSMUST00000094493 780 ntBASIC32.24■■■□□ 2.75
Xrn1P97789 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Xrn1P97789 Gm28536-201ENSMUST00000190971 1317 ntBASIC32.23■■■□□ 2.75
Xrn1P97789 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Xrn1P97789 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC32.22■■■□□ 2.75
Xrn1P97789 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Xrn1P97789 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Xrn1P97789 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms