Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cacna1aP97445 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1aP97445 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1aP97445 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1aP97445 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cacna1aP97445 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1aP97445 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.42■□□□□ 0.86
Cacna1aP97445 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1aP97445 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1aP97445 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1aP97445 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1aP97445 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1aP97445 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.4■□□□□ 0.86
Cacna1aP97445 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1aP97445 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Cacna1aP97445 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.39■□□□□ 0.86
Cacna1aP97445 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1aP97445 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1aP97445 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1aP97445 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1aP97445 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1aP97445 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cacna1aP97445 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.37■□□□□ 0.85
Cacna1aP97445 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1aP97445 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cacna1aP97445 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.37■□□□□ 0.85
Cacna1aP97445 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1aP97445 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1aP97445 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.36■□□□□ 0.85
Cacna1aP97445 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.36■□□□□ 0.85
Cacna1aP97445 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.36■□□□□ 0.85
Cacna1aP97445 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1aP97445 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1aP97445 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1aP97445 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.36■□□□□ 0.85
Cacna1aP97445 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1aP97445 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.35■□□□□ 0.85
Cacna1aP97445 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.35■□□□□ 0.85
Cacna1aP97445 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.35■□□□□ 0.85
Cacna1aP97445 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1aP97445 Gm9847-201ENSMUST00000052528 599 ntBASIC20.35■□□□□ 0.85
Cacna1aP97445 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1aP97445 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cacna1aP97445 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1aP97445 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.34■□□□□ 0.85
Cacna1aP97445 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1aP97445 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1aP97445 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1aP97445 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1aP97445 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1aP97445 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.33■□□□□ 0.85
Cacna1aP97445 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacna1aP97445 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1aP97445 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cacna1aP97445 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cacna1aP97445 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Cacna1aP97445 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1aP97445 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1aP97445 Gm12922-201ENSMUST00000120626 809 ntBASIC20.31■□□□□ 0.84
Cacna1aP97445 Gm7417-201ENSMUST00000192950 473 ntBASIC20.31■□□□□ 0.84
Cacna1aP97445 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cacna1aP97445 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.31■□□□□ 0.84
Cacna1aP97445 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1aP97445 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1aP97445 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1aP97445 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1aP97445 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.3■□□□□ 0.84
Cacna1aP97445 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1aP97445 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1aP97445 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1aP97445 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1aP97445 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1aP97445 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1aP97445 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cacna1aP97445 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cacna1aP97445 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1aP97445 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Cacna1aP97445 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1aP97445 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.26■□□□□ 0.83
Cacna1aP97445 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1aP97445 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cacna1aP97445 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1aP97445 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.25■□□□□ 0.83
Cacna1aP97445 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.25■□□□□ 0.83
Cacna1aP97445 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.25■□□□□ 0.83
Cacna1aP97445 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1aP97445 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.24■□□□□ 0.83
Cacna1aP97445 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.24■□□□□ 0.83
Cacna1aP97445 Gm22238-201ENSMUST00000175222 88 ntBASIC20.24■□□□□ 0.83
Cacna1aP97445 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1aP97445 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.24■□□□□ 0.83
Cacna1aP97445 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.24■□□□□ 0.83
Cacna1aP97445 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms