Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
H3f3aP84244 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H3f3aP84244 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H3f3aP84244 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H3f3aP84244 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.55■□□□□ 0.72
H3f3aP84244 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H3f3aP84244 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H3f3aP84244 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H3f3aP84244 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.54■□□□□ 0.72
H3f3aP84244 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
H3f3aP84244 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
H3f3aP84244 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
H3f3aP84244 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H3f3aP84244 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
H3f3aP84244 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H3f3aP84244 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3f3aP84244 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3f3aP84244 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3f3aP84244 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H3f3aP84244 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3f3aP84244 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H3f3aP84244 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H3f3aP84244 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
H3f3aP84244 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
H3f3aP84244 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
H3f3aP84244 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.51■□□□□ 0.71
H3f3aP84244 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
H3f3aP84244 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3f3aP84244 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.5■□□□□ 0.71
H3f3aP84244 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H3f3aP84244 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
H3f3aP84244 Gm10420-201ENSMUST00000121713 882 ntBASIC19.49■□□□□ 0.71
H3f3aP84244 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3f3aP84244 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3f3aP84244 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H3f3aP84244 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H3f3aP84244 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.48■□□□□ 0.71
H3f3aP84244 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.48■□□□□ 0.71
H3f3aP84244 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H3f3aP84244 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3f3aP84244 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3f3aP84244 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.47■□□□□ 0.71
H3f3aP84244 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3f3aP84244 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3f3aP84244 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3f3aP84244 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
H3f3aP84244 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
H3f3aP84244 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
H3f3aP84244 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3f3aP84244 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3f3aP84244 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3f3aP84244 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3f3aP84244 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3f3aP84244 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3f3aP84244 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
H3f3aP84244 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3f3aP84244 Gm22567-201ENSMUST00000175542 342 ntBASIC19.44■□□□□ 0.7
H3f3aP84244 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.44■□□□□ 0.7
H3f3aP84244 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3f3aP84244 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3f3aP84244 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
H3f3aP84244 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3f3aP84244 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.44■□□□□ 0.7
H3f3aP84244 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
H3f3aP84244 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.43■□□□□ 0.7
H3f3aP84244 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
H3f3aP84244 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3f3aP84244 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
H3f3aP84244 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3f3aP84244 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3f3aP84244 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3f3aP84244 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3f3aP84244 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.42■□□□□ 0.7
H3f3aP84244 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3f3aP84244 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms