Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SgcbP82349 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SgcbP82349 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SgcbP82349 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
SgcbP82349 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.51■□□□□ 0.71
SgcbP82349 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.51■□□□□ 0.71
SgcbP82349 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcbP82349 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcbP82349 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SgcbP82349 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SgcbP82349 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcbP82349 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SgcbP82349 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SgcbP82349 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SgcbP82349 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SgcbP82349 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SgcbP82349 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcbP82349 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcbP82349 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SgcbP82349 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcbP82349 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SgcbP82349 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcbP82349 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.49■□□□□ 0.71
SgcbP82349 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SgcbP82349 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SgcbP82349 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SgcbP82349 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcbP82349 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SgcbP82349 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SgcbP82349 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcbP82349 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcbP82349 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SgcbP82349 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcbP82349 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcbP82349 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SgcbP82349 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SgcbP82349 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SgcbP82349 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcbP82349 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SgcbP82349 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcbP82349 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SgcbP82349 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SgcbP82349 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcbP82349 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcbP82349 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcbP82349 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SgcbP82349 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcbP82349 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SgcbP82349 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SgcbP82349 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.44■□□□□ 0.7
SgcbP82349 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.44■□□□□ 0.7
SgcbP82349 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SgcbP82349 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SgcbP82349 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SgcbP82349 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SgcbP82349 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.43■□□□□ 0.7
SgcbP82349 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SgcbP82349 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SgcbP82349 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SgcbP82349 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SgcbP82349 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcbP82349 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SgcbP82349 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.41■□□□□ 0.7
SgcbP82349 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcbP82349 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SgcbP82349 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcbP82349 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.41■□□□□ 0.7
SgcbP82349 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcbP82349 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcbP82349 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcbP82349 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcbP82349 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcbP82349 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcbP82349 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcbP82349 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcbP82349 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcbP82349 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.39■□□□□ 0.69
SgcbP82349 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcbP82349 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcbP82349 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SgcbP82349 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.38■□□□□ 0.69
SgcbP82349 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SgcbP82349 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcbP82349 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcbP82349 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcbP82349 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms