Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
Sssca1P56873 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Sssca1P56873 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.64■□□□□ 0.42
Sssca1P56873 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sssca1P56873 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Sssca1P56873 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Sssca1P56873 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sssca1P56873 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.64■□□□□ 0.41
Sssca1P56873 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sssca1P56873 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sssca1P56873 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sssca1P56873 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sssca1P56873 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sssca1P56873 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sssca1P56873 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sssca1P56873 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sssca1P56873 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sssca1P56873 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sssca1P56873 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.62■□□□□ 0.41
Sssca1P56873 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sssca1P56873 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sssca1P56873 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.61■□□□□ 0.41
Sssca1P56873 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sssca1P56873 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.61■□□□□ 0.41
Sssca1P56873 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.61■□□□□ 0.41
Sssca1P56873 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sssca1P56873 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sssca1P56873 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sssca1P56873 Gm4799-201ENSMUST00000095396 657 ntBASIC17.6■□□□□ 0.41
Sssca1P56873 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.6■□□□□ 0.41
Sssca1P56873 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.6■□□□□ 0.41
Sssca1P56873 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sssca1P56873 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Sssca1P56873 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.59■□□□□ 0.41
Sssca1P56873 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sssca1P56873 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sssca1P56873 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sssca1P56873 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sssca1P56873 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sssca1P56873 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sssca1P56873 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.57■□□□□ 0.4
Sssca1P56873 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
Sssca1P56873 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.57■□□□□ 0.4
Sssca1P56873 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.57■□□□□ 0.4
Sssca1P56873 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sssca1P56873 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sssca1P56873 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sssca1P56873 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.56■□□□□ 0.4
Sssca1P56873 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sssca1P56873 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sssca1P56873 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sssca1P56873 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sssca1P56873 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sssca1P56873 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Sssca1P56873 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sssca1P56873 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sssca1P56873 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sssca1P56873 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sssca1P56873 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sssca1P56873 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sssca1P56873 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sssca1P56873 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sssca1P56873 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sssca1P56873 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sssca1P56873 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sssca1P56873 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sssca1P56873 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sssca1P56873 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.53■□□□□ 0.4
Sssca1P56873 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.53■□□□□ 0.4
Sssca1P56873 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sssca1P56873 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sssca1P56873 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sssca1P56873 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sssca1P56873 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sssca1P56873 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sssca1P56873 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sssca1P56873 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.52■□□□□ 0.4
Sssca1P56873 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.52■□□□□ 0.4
Sssca1P56873 Gm9812-201ENSMUST00000061934 968 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms