Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkn2bP55271 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Cdkn2bP55271 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkn2bP55271 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cdkn2bP55271 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.08■□□□□ 0.97
Cdkn2bP55271 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkn2bP55271 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkn2bP55271 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.08■□□□□ 0.97
Cdkn2bP55271 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkn2bP55271 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkn2bP55271 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.07■□□□□ 0.96
Cdkn2bP55271 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Gm45364-201ENSMUST00000210883 159 ntBASIC21.07■□□□□ 0.96
Cdkn2bP55271 Terc-201ENSMUST00000082862 423 ntBASIC21.07■□□□□ 0.96
Cdkn2bP55271 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkn2bP55271 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkn2bP55271 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.06■□□□□ 0.96
Cdkn2bP55271 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkn2bP55271 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cdkn2bP55271 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cdkn2bP55271 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkn2bP55271 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.05■□□□□ 0.96
Cdkn2bP55271 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkn2bP55271 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkn2bP55271 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkn2bP55271 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkn2bP55271 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cdkn2bP55271 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.04■□□□□ 0.96
Cdkn2bP55271 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cdkn2bP55271 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkn2bP55271 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkn2bP55271 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkn2bP55271 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.03■□□□□ 0.96
Cdkn2bP55271 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkn2bP55271 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkn2bP55271 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkn2bP55271 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.01■□□□□ 0.95
Cdkn2bP55271 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21■□□□□ 0.95
Cdkn2bP55271 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21■□□□□ 0.95
Cdkn2bP55271 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cdkn2bP55271 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkn2bP55271 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkn2bP55271 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkn2bP55271 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkn2bP55271 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdkn2bP55271 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdkn2bP55271 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdkn2bP55271 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkn2bP55271 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkn2bP55271 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cdkn2bP55271 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkn2bP55271 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.94■□□□□ 0.94
Cdkn2bP55271 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkn2bP55271 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cdkn2bP55271 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.94■□□□□ 0.94
Cdkn2bP55271 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdkn2bP55271 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkn2bP55271 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkn2bP55271 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkn2bP55271 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Cdkn2bP55271 Gm7432-201ENSMUST00000210343 879 ntBASIC20.93■□□□□ 0.94
Cdkn2bP55271 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkn2bP55271 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkn2bP55271 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms