Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NcanP55066 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NcanP55066 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NcanP55066 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NcanP55066 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NcanP55066 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NcanP55066 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NcanP55066 Gm27454-201ENSMUST00000185090 204 ntBASIC23.86■■□□□ 1.41
NcanP55066 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.86■■□□□ 1.41
NcanP55066 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NcanP55066 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NcanP55066 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
NcanP55066 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
NcanP55066 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
NcanP55066 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
NcanP55066 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
NcanP55066 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.84■■□□□ 1.41
NcanP55066 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.84■■□□□ 1.41
NcanP55066 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NcanP55066 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NcanP55066 Gm45417-201ENSMUST00000209533 758 ntBASIC23.84■■□□□ 1.41
NcanP55066 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NcanP55066 Gm12821-201ENSMUST00000120022 600 ntBASIC23.83■■□□□ 1.41
NcanP55066 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.83■■□□□ 1.41
NcanP55066 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.83■■□□□ 1.41
NcanP55066 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.83■■□□□ 1.4
NcanP55066 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NcanP55066 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.82■■□□□ 1.4
NcanP55066 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NcanP55066 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NcanP55066 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.81■■□□□ 1.4
NcanP55066 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NcanP55066 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NcanP55066 Gm40881-201ENSMUST00000223397 166 ntBASIC23.8■■□□□ 1.4
NcanP55066 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NcanP55066 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NcanP55066 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.79■■□□□ 1.4
NcanP55066 Gm12922-201ENSMUST00000120626 809 ntBASIC23.79■■□□□ 1.4
NcanP55066 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NcanP55066 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.79■■□□□ 1.4
NcanP55066 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.79■■□□□ 1.4
NcanP55066 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NcanP55066 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NcanP55066 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NcanP55066 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NcanP55066 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NcanP55066 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NcanP55066 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.78■■□□□ 1.4
NcanP55066 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.78■■□□□ 1.4
NcanP55066 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NcanP55066 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.78■■□□□ 1.4
NcanP55066 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NcanP55066 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NcanP55066 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.77■■□□□ 1.4
NcanP55066 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NcanP55066 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
NcanP55066 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.76■■□□□ 1.39
NcanP55066 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NcanP55066 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NcanP55066 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NcanP55066 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NcanP55066 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.74■■□□□ 1.39
NcanP55066 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NcanP55066 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.74■■□□□ 1.39
NcanP55066 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
NcanP55066 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NcanP55066 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.74■■□□□ 1.39
NcanP55066 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NcanP55066 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
NcanP55066 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.73■■□□□ 1.39
NcanP55066 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.73■■□□□ 1.39
NcanP55066 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.73■■□□□ 1.39
NcanP55066 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
NcanP55066 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
NcanP55066 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NcanP55066 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NcanP55066 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.71■■□□□ 1.39
NcanP55066 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NcanP55066 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NcanP55066 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NcanP55066 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NcanP55066 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
NcanP55066 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NcanP55066 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.7■■□□□ 1.38
NcanP55066 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NcanP55066 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.69■■□□□ 1.38
NcanP55066 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
NcanP55066 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
NcanP55066 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
NcanP55066 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.69■■□□□ 1.38
NcanP55066 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NcanP55066 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NcanP55066 Amer2-203ENSMUST00000225247 2662 ntBASIC23.68■■□□□ 1.38
NcanP55066 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NcanP55066 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.68■■□□□ 1.38
NcanP55066 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.68■■□□□ 1.38
NcanP55066 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
NcanP55066 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NcanP55066 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
NcanP55066 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms