Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp9P49962 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp9P49962 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp9P49962 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srp9P49962 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Srp9P49962 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp9P49962 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srp9P49962 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.51■□□□□ 0.55
Srp9P49962 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.51■□□□□ 0.55
Srp9P49962 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.51■□□□□ 0.55
Srp9P49962 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp9P49962 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srp9P49962 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.5■□□□□ 0.55
Srp9P49962 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.5■□□□□ 0.55
Srp9P49962 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srp9P49962 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.49■□□□□ 0.55
Srp9P49962 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.49■□□□□ 0.55
Srp9P49962 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp9P49962 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp9P49962 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Srp9P49962 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.48■□□□□ 0.55
Srp9P49962 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp9P49962 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Srp9P49962 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp9P49962 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.47■□□□□ 0.55
Srp9P49962 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp9P49962 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Srp9P49962 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp9P49962 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp9P49962 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srp9P49962 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp9P49962 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srp9P49962 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Srp9P49962 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp9P49962 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp9P49962 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp9P49962 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp9P49962 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp9P49962 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp9P49962 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Srp9P49962 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srp9P49962 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srp9P49962 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Srp9P49962 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.44■□□□□ 0.54
Srp9P49962 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srp9P49962 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srp9P49962 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srp9P49962 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Srp9P49962 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Srp9P49962 Mir3960-201ENSMUST00000198213 73 ntBASIC18.43■□□□□ 0.54
Srp9P49962 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Srp9P49962 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.43■□□□□ 0.54
Srp9P49962 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Srp9P49962 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srp9P49962 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Srp9P49962 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.42■□□□□ 0.54
Srp9P49962 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.42■□□□□ 0.54
Srp9P49962 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srp9P49962 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Srp9P49962 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Srp9P49962 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srp9P49962 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.41■□□□□ 0.54
Srp9P49962 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Srp9P49962 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srp9P49962 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srp9P49962 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Srp9P49962 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.4■□□□□ 0.54
Srp9P49962 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srp9P49962 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Srp9P49962 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srp9P49962 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srp9P49962 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Srp9P49962 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Srp9P49962 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srp9P49962 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srp9P49962 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srp9P49962 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srp9P49962 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srp9P49962 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms