Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfx3P48381 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx3P48381 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx3P48381 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx3P48381 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx3P48381 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx3P48381 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx3P48381 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.71■□□□□ 0.75
Rfx3P48381 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx3P48381 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.71■□□□□ 0.75
Rfx3P48381 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx3P48381 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rfx3P48381 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx3P48381 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx3P48381 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rfx3P48381 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx3P48381 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.69■□□□□ 0.74
Rfx3P48381 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx3P48381 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.69■□□□□ 0.74
Rfx3P48381 Terc-201ENSMUST00000082862 423 ntBASIC19.69■□□□□ 0.74
Rfx3P48381 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx3P48381 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rfx3P48381 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx3P48381 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx3P48381 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx3P48381 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx3P48381 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfx3P48381 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx3P48381 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rfx3P48381 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfx3P48381 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx3P48381 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx3P48381 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfx3P48381 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx3P48381 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx3P48381 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx3P48381 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.66■□□□□ 0.74
Rfx3P48381 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx3P48381 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx3P48381 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rfx3P48381 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx3P48381 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx3P48381 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx3P48381 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rfx3P48381 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.65■□□□□ 0.74
Rfx3P48381 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfx3P48381 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfx3P48381 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rfx3P48381 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.64■□□□□ 0.73
Rfx3P48381 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.64■□□□□ 0.73
Rfx3P48381 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx3P48381 Gm6311-201ENSMUST00000073790 878 ntBASIC19.64■□□□□ 0.73
Rfx3P48381 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx3P48381 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rfx3P48381 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Rfx3P48381 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx3P48381 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.63■□□□□ 0.73
Rfx3P48381 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.63■□□□□ 0.73
Rfx3P48381 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx3P48381 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx3P48381 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.63■□□□□ 0.73
Rfx3P48381 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.63■□□□□ 0.73
Rfx3P48381 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfx3P48381 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx3P48381 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Rfx3P48381 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx3P48381 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfx3P48381 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx3P48381 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx3P48381 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx3P48381 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx3P48381 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx3P48381 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.61■□□□□ 0.73
Rfx3P48381 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rfx3P48381 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx3P48381 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfx3P48381 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx3P48381 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rfx3P48381 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.6■□□□□ 0.73
Rfx3P48381 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx3P48381 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.59■□□□□ 0.73
Rfx3P48381 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rfx3P48381 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx3P48381 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx3P48381 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Rfx3P48381 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx3P48381 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx3P48381 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx3P48381 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Rfx3P48381 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rfx3P48381 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rfx3P48381 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx3P48381 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.57■□□□□ 0.72
Rfx3P48381 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx3P48381 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx3P48381 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx3P48381 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rfx3P48381 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rfx3P48381 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx3P48381 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms