Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf9P41274 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf9P41274 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf9P41274 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfsf9P41274 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Tnfsf9P41274 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Tnfsf9P41274 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfsf9P41274 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21■□□□□ 0.95
Tnfsf9P41274 Gm43566-201ENSMUST00000196851 808 ntBASIC21■□□□□ 0.95
Tnfsf9P41274 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Tnfsf9P41274 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tnfsf9P41274 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tnfsf9P41274 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tnfsf9P41274 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfsf9P41274 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfsf9P41274 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tnfsf9P41274 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnfsf9P41274 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf9P41274 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf9P41274 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf9P41274 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf9P41274 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf9P41274 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tnfsf9P41274 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Tnfsf9P41274 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfsf9P41274 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.97■□□□□ 0.95
Tnfsf9P41274 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.97■□□□□ 0.95
Tnfsf9P41274 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tnfsf9P41274 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Gm15546-201ENSMUST00000122095 826 ntBASIC20.96■□□□□ 0.95
Tnfsf9P41274 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.96■□□□□ 0.95
Tnfsf9P41274 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.95■□□□□ 0.94
Tnfsf9P41274 Gm13238-201ENSMUST00000117655 780 ntBASIC20.95■□□□□ 0.94
Tnfsf9P41274 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tnfsf9P41274 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfsf9P41274 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfsf9P41274 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.94■□□□□ 0.94
Tnfsf9P41274 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfsf9P41274 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfsf9P41274 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfsf9P41274 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfsf9P41274 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf9P41274 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf9P41274 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf9P41274 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.92■□□□□ 0.94
Tnfsf9P41274 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf9P41274 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.92■□□□□ 0.94
Tnfsf9P41274 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf9P41274 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf9P41274 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf9P41274 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf9P41274 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tnfsf9P41274 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfsf9P41274 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfsf9P41274 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.9■□□□□ 0.94
Tnfsf9P41274 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Tnfsf9P41274 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfsf9P41274 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Tnfsf9P41274 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfsf9P41274 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfsf9P41274 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tnfsf9P41274 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Gm15820-201ENSMUST00000201566 728 ntBASIC20.88■□□□□ 0.93
Tnfsf9P41274 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf9P41274 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.87■□□□□ 0.93
Tnfsf9P41274 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tnfsf9P41274 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf9P41274 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf9P41274 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnfsf9P41274 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnfsf9P41274 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf9P41274 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Tnfsf9P41274 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.85■□□□□ 0.93
Tnfsf9P41274 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.85■□□□□ 0.93
Tnfsf9P41274 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms