Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf1bP25119 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tnfrsf1bP25119 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf1bP25119 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf1bP25119 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf1bP25119 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf1bP25119 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf1bP25119 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf1bP25119 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf1bP25119 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfrsf1bP25119 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf1bP25119 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf1bP25119 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf1bP25119 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.25■□□□□ 0.83
Tnfrsf1bP25119 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf1bP25119 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf1bP25119 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf1bP25119 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tnfrsf1bP25119 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf1bP25119 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf1bP25119 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tnfrsf1bP25119 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1bP25119 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tnfrsf1bP25119 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.2■□□□□ 0.82
Tnfrsf1bP25119 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1bP25119 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1bP25119 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.18■□□□□ 0.82
Tnfrsf1bP25119 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.17■□□□□ 0.82
Tnfrsf1bP25119 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms