Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cbx3P23198 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cbx3P23198 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cbx3P23198 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cbx3P23198 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Cbx3P23198 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cbx3P23198 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cbx3P23198 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Cbx3P23198 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cbx3P23198 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cbx3P23198 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cbx3P23198 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cbx3P23198 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cbx3P23198 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cbx3P23198 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cbx3P23198 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cbx3P23198 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cbx3P23198 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.8■□□□□ 0.76
Cbx3P23198 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cbx3P23198 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cbx3P23198 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cbx3P23198 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx3P23198 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx3P23198 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx3P23198 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cbx3P23198 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cbx3P23198 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx3P23198 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx3P23198 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.77■□□□□ 0.76
Cbx3P23198 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx3P23198 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cbx3P23198 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx3P23198 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.77■□□□□ 0.76
Cbx3P23198 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx3P23198 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cbx3P23198 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Cbx3P23198 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Cbx3P23198 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.75■□□□□ 0.75
Cbx3P23198 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.75■□□□□ 0.75
Cbx3P23198 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.75■□□□□ 0.75
Cbx3P23198 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cbx3P23198 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx3P23198 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx3P23198 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx3P23198 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx3P23198 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cbx3P23198 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx3P23198 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx3P23198 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx3P23198 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.73■□□□□ 0.75
Cbx3P23198 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx3P23198 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cbx3P23198 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx3P23198 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx3P23198 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx3P23198 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx3P23198 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cbx3P23198 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cbx3P23198 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cbx3P23198 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.71■□□□□ 0.75
Cbx3P23198 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Cbx3P23198 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.7■□□□□ 0.74
Cbx3P23198 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 Zfp131-205ENSMUST00000223812 663 ntBASIC19.7■□□□□ 0.74
Cbx3P23198 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.7■□□□□ 0.74
Cbx3P23198 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cbx3P23198 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx3P23198 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx3P23198 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.69■□□□□ 0.74
Cbx3P23198 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx3P23198 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cbx3P23198 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx3P23198 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cbx3P23198 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx3P23198 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.68■□□□□ 0.74
Cbx3P23198 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx3P23198 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cbx3P23198 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cbx3P23198 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cbx3P23198 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx3P23198 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx3P23198 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.67■□□□□ 0.74
Cbx3P23198 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cbx3P23198 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx3P23198 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx3P23198 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cbx3P23198 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms