Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BdnfP21237 Mir3960-201ENSMUST00000198213 73 ntBASIC20.92■□□□□ 0.94
BdnfP21237 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BdnfP21237 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
BdnfP21237 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BdnfP21237 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
BdnfP21237 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BdnfP21237 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.91■□□□□ 0.94
BdnfP21237 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BdnfP21237 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BdnfP21237 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BdnfP21237 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BdnfP21237 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BdnfP21237 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BdnfP21237 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BdnfP21237 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BdnfP21237 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BdnfP21237 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.89■□□□□ 0.94
BdnfP21237 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.89■□□□□ 0.94
BdnfP21237 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BdnfP21237 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BdnfP21237 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BdnfP21237 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
BdnfP21237 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BdnfP21237 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BdnfP21237 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BdnfP21237 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BdnfP21237 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BdnfP21237 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BdnfP21237 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BdnfP21237 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
BdnfP21237 Gm45364-201ENSMUST00000210883 159 ntBASIC20.87■□□□□ 0.93
BdnfP21237 Gm9812-201ENSMUST00000061934 968 ntBASIC20.87■□□□□ 0.93
BdnfP21237 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BdnfP21237 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BdnfP21237 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.86■□□□□ 0.93
BdnfP21237 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BdnfP21237 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.86■□□□□ 0.93
BdnfP21237 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BdnfP21237 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
BdnfP21237 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BdnfP21237 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BdnfP21237 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BdnfP21237 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BdnfP21237 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
BdnfP21237 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BdnfP21237 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
BdnfP21237 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.85■□□□□ 0.93
BdnfP21237 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BdnfP21237 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BdnfP21237 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.84■□□□□ 0.93
BdnfP21237 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
BdnfP21237 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BdnfP21237 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.84■□□□□ 0.93
BdnfP21237 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BdnfP21237 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BdnfP21237 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.84■□□□□ 0.93
BdnfP21237 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BdnfP21237 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BdnfP21237 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.83■□□□□ 0.93
BdnfP21237 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BdnfP21237 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BdnfP21237 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.82■□□□□ 0.92
BdnfP21237 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BdnfP21237 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BdnfP21237 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BdnfP21237 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
BdnfP21237 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.82■□□□□ 0.92
BdnfP21237 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BdnfP21237 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BdnfP21237 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
BdnfP21237 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BdnfP21237 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BdnfP21237 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.81■□□□□ 0.92
BdnfP21237 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BdnfP21237 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BdnfP21237 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.8■□□□□ 0.92
BdnfP21237 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BdnfP21237 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BdnfP21237 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BdnfP21237 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BdnfP21237 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
BdnfP21237 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BdnfP21237 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.79■□□□□ 0.92
BdnfP21237 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BdnfP21237 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BdnfP21237 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BdnfP21237 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.78■□□□□ 0.92
BdnfP21237 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BdnfP21237 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BdnfP21237 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.78■□□□□ 0.92
BdnfP21237 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BdnfP21237 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BdnfP21237 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BdnfP21237 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
BdnfP21237 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BdnfP21237 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BdnfP21237 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.77■□□□□ 0.92
BdnfP21237 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BdnfP21237 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms