Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.37■□□□□ 0.69
P20040 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P20040 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P20040 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P20040 Gm11687-201ENSMUST00000118911 886 ntBASIC19.36■□□□□ 0.69
P20040 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.36■□□□□ 0.69
P20040 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.35■□□□□ 0.69
P20040 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.35■□□□□ 0.69
P20040 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.35■□□□□ 0.69
P20040 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P20040 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P20040 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P20040 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
P20040 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.34■□□□□ 0.69
P20040 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
P20040 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P20040 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
P20040 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
P20040 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P20040 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P20040 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P20040 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
P20040 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.32■□□□□ 0.68
P20040 Gm16437-201ENSMUST00000025669 507 ntBASIC19.32■□□□□ 0.68
P20040 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
P20040 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
P20040 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
P20040 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.3■□□□□ 0.68
P20040 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P20040 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.29■□□□□ 0.68
P20040 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.29■□□□□ 0.68
P20040 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P20040 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
P20040 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P20040 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
P20040 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P20040 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
P20040 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P20040 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
P20040 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
P20040 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.27■□□□□ 0.68
P20040 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P20040 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P20040 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.26■□□□□ 0.67
P20040 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.26■□□□□ 0.67
P20040 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
P20040 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P20040 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Terc-201ENSMUST00000082862 423 ntBASIC19.24■□□□□ 0.67
P20040 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.24■□□□□ 0.67
P20040 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.23■□□□□ 0.67
P20040 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.23■□□□□ 0.67
P20040 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms