Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntn1P12960 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.03■□□□□ 0.96
Cntn1P12960 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntn1P12960 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntn1P12960 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntn1P12960 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cntn1P12960 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cntn1P12960 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cntn1P12960 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Cntn1P12960 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cntn1P12960 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cntn1P12960 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntn1P12960 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cntn1P12960 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21■□□□□ 0.95
Cntn1P12960 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntn1P12960 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntn1P12960 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntn1P12960 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.99■□□□□ 0.95
Cntn1P12960 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.99■□□□□ 0.95
Cntn1P12960 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.99■□□□□ 0.95
Cntn1P12960 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cntn1P12960 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntn1P12960 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.98■□□□□ 0.95
Cntn1P12960 Gm13238-201ENSMUST00000117655 780 ntBASIC20.98■□□□□ 0.95
Cntn1P12960 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cntn1P12960 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntn1P12960 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntn1P12960 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntn1P12960 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.98■□□□□ 0.95
Cntn1P12960 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntn1P12960 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cntn1P12960 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cntn1P12960 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntn1P12960 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.97■□□□□ 0.95
Cntn1P12960 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cntn1P12960 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntn1P12960 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Cntn1P12960 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntn1P12960 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cntn1P12960 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntn1P12960 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.96■□□□□ 0.95
Cntn1P12960 Gm5812-201ENSMUST00000061073 957 ntBASIC20.96■□□□□ 0.95
Cntn1P12960 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntn1P12960 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cntn1P12960 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cntn1P12960 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.95■□□□□ 0.94
Cntn1P12960 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cntn1P12960 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cntn1P12960 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cntn1P12960 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cntn1P12960 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cntn1P12960 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntn1P12960 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Cntn1P12960 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntn1P12960 Gm45444-201ENSMUST00000211394 898 ntBASIC20.93■□□□□ 0.94
Cntn1P12960 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cntn1P12960 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntn1P12960 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntn1P12960 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cntn1P12960 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cntn1P12960 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cntn1P12960 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cntn1P12960 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cntn1P12960 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntn1P12960 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntn1P12960 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cntn1P12960 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cntn1P12960 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntn1P12960 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cntn1P12960 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Cntn1P12960 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Cntn1P12960 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntn1P12960 Gm43566-201ENSMUST00000196851 808 ntBASIC20.91■□□□□ 0.94
Cntn1P12960 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntn1P12960 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntn1P12960 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Cntn1P12960 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntn1P12960 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cntn1P12960 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cntn1P12960 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntn1P12960 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntn1P12960 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms