Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl1P12850 Gm22567-201ENSMUST00000175542 342 ntBASIC18.16■□□□□ 0.5
Cxcl1P12850 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl1P12850 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl1P12850 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.15■□□□□ 0.5
Cxcl1P12850 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl1P12850 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl1P12850 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.15■□□□□ 0.5
Cxcl1P12850 Gm4799-201ENSMUST00000095396 657 ntBASIC18.15■□□□□ 0.5
Cxcl1P12850 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl1P12850 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.15■□□□□ 0.5
Cxcl1P12850 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cxcl1P12850 Gm9812-201ENSMUST00000061934 968 ntBASIC18.14■□□□□ 0.49
Cxcl1P12850 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl1P12850 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl1P12850 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl1P12850 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.12■□□□□ 0.49
Cxcl1P12850 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl1P12850 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
Cxcl1P12850 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.12■□□□□ 0.49
Cxcl1P12850 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl1P12850 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl1P12850 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cxcl1P12850 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cxcl1P12850 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl1P12850 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl1P12850 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl1P12850 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cxcl1P12850 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cxcl1P12850 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.11■□□□□ 0.49
Cxcl1P12850 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.11■□□□□ 0.49
Cxcl1P12850 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cxcl1P12850 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl1P12850 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cxcl1P12850 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl1P12850 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl1P12850 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl1P12850 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.1■□□□□ 0.49
Cxcl1P12850 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl1P12850 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl1P12850 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl1P12850 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl1P12850 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl1P12850 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl1P12850 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.09■□□□□ 0.49
Cxcl1P12850 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl1P12850 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cxcl1P12850 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Cxcl1P12850 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl1P12850 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cxcl1P12850 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.08■□□□□ 0.48
Cxcl1P12850 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cxcl1P12850 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.08■□□□□ 0.48
Cxcl1P12850 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl1P12850 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.07■□□□□ 0.48
Cxcl1P12850 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cxcl1P12850 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl1P12850 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl1P12850 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl1P12850 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cxcl1P12850 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl1P12850 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.06■□□□□ 0.48
Cxcl1P12850 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.06■□□□□ 0.48
Cxcl1P12850 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl1P12850 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl1P12850 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.06■□□□□ 0.48
Cxcl1P12850 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl1P12850 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.05■□□□□ 0.48
Cxcl1P12850 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl1P12850 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl1P12850 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl1P12850 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl1P12850 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
Cxcl1P12850 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.04■□□□□ 0.48
Cxcl1P12850 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl1P12850 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl1P12850 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcl1P12850 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl1P12850 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Cxcl1P12850 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl1P12850 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cxcl1P12850 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcl1P12850 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.04■□□□□ 0.48
Cxcl1P12850 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl1P12850 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl1P12850 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl1P12850 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl1P12850 Mir3960-201ENSMUST00000198213 73 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms