Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt1P04104 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt1P04104 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt1P04104 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt1P04104 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt1P04104 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt1P04104 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Krt1P04104 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt1P04104 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt1P04104 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.76■□□□□ 0.91
Krt1P04104 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt1P04104 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt1P04104 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.76■□□□□ 0.91
Krt1P04104 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt1P04104 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt1P04104 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt1P04104 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt1P04104 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt1P04104 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt1P04104 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.75■□□□□ 0.91
Krt1P04104 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt1P04104 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Krt1P04104 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Krt1P04104 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.74■□□□□ 0.91
Krt1P04104 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.74■□□□□ 0.91
Krt1P04104 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.74■□□□□ 0.91
Krt1P04104 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Krt1P04104 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt1P04104 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt1P04104 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Krt1P04104 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt1P04104 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt1P04104 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt1P04104 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Krt1P04104 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt1P04104 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Krt1P04104 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.72■□□□□ 0.91
Krt1P04104 Notumos-201ENSMUST00000151998 2659 ntBASIC20.71■□□□□ 0.91
Krt1P04104 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt1P04104 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Krt1P04104 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.7■□□□□ 0.91
Krt1P04104 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.7■□□□□ 0.9
Krt1P04104 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt1P04104 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt1P04104 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt1P04104 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Krt1P04104 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt1P04104 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Krt1P04104 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt1P04104 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Krt1P04104 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt1P04104 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt1P04104 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt1P04104 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt1P04104 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt1P04104 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt1P04104 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Krt1P04104 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Krt1P04104 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt1P04104 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.66■□□□□ 0.9
Krt1P04104 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Krt1P04104 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt1P04104 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Krt1P04104 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt1P04104 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Krt1P04104 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Krt1P04104 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt1P04104 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt1P04104 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt1P04104 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt1P04104 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt1P04104 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt1P04104 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.63■□□□□ 0.89
Krt1P04104 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt1P04104 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt1P04104 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt1P04104 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt1P04104 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt1P04104 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt1P04104 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.62■□□□□ 0.89
Krt1P04104 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt1P04104 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.6■□□□□ 0.89
Krt1P04104 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.6■□□□□ 0.89
Krt1P04104 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt1P04104 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt1P04104 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt1P04104 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt1P04104 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Krt1P04104 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.59■□□□□ 0.89
Krt1P04104 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Krt1P04104 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt1P04104 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt1P04104 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt1P04104 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms