Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn3O88705 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.96■□□□□ 0.95
Hcn3O88705 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn3O88705 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn3O88705 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.96■□□□□ 0.95
Hcn3O88705 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Hcn3O88705 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Hcn3O88705 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn3O88705 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn3O88705 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn3O88705 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn3O88705 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn3O88705 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn3O88705 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.94■□□□□ 0.94
Hcn3O88705 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.94■□□□□ 0.94
Hcn3O88705 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.94■□□□□ 0.94
Hcn3O88705 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.94■□□□□ 0.94
Hcn3O88705 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn3O88705 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn3O88705 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn3O88705 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hcn3O88705 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn3O88705 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn3O88705 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn3O88705 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
Hcn3O88705 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Hcn3O88705 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hcn3O88705 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.9■□□□□ 0.94
Hcn3O88705 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn3O88705 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn3O88705 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn3O88705 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn3O88705 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn3O88705 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn3O88705 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hcn3O88705 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hcn3O88705 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hcn3O88705 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hcn3O88705 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn3O88705 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn3O88705 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hcn3O88705 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn3O88705 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn3O88705 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Hcn3O88705 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.86■□□□□ 0.93
Hcn3O88705 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn3O88705 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn3O88705 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn3O88705 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn3O88705 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn3O88705 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hcn3O88705 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn3O88705 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hcn3O88705 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Hcn3O88705 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn3O88705 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn3O88705 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn3O88705 Gm37136-201ENSMUST00000194368 194 ntBASIC20.83■□□□□ 0.93
Hcn3O88705 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hcn3O88705 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hcn3O88705 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hcn3O88705 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Hcn3O88705 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn3O88705 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.82■□□□□ 0.92
Hcn3O88705 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hcn3O88705 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hcn3O88705 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn3O88705 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn3O88705 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn3O88705 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn3O88705 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn3O88705 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Hcn3O88705 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.81■□□□□ 0.92
Hcn3O88705 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.81■□□□□ 0.92
Hcn3O88705 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hcn3O88705 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcn3O88705 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcn3O88705 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn3O88705 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn3O88705 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn3O88705 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcn3O88705 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcn3O88705 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcn3O88705 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcn3O88705 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcn3O88705 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcn3O88705 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms