Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.73■□□□□ 0.59
Cldn1O88551 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn1O88551 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.73■□□□□ 0.59
Cldn1O88551 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.73■□□□□ 0.59
Cldn1O88551 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn1O88551 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn1O88551 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldn1O88551 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldn1O88551 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldn1O88551 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn1O88551 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn1O88551 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.72■□□□□ 0.59
Cldn1O88551 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn1O88551 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn1O88551 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.71■□□□□ 0.59
Cldn1O88551 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.71■□□□□ 0.59
Cldn1O88551 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn1O88551 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn1O88551 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.7■□□□□ 0.58
Cldn1O88551 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.7■□□□□ 0.58
Cldn1O88551 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cldn1O88551 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn1O88551 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.69■□□□□ 0.58
Cldn1O88551 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn1O88551 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn1O88551 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn1O88551 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn1O88551 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn1O88551 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cldn1O88551 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn1O88551 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cldn1O88551 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.67■□□□□ 0.58
Cldn1O88551 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn1O88551 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn1O88551 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn1O88551 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn1O88551 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn1O88551 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn1O88551 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn1O88551 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cldn1O88551 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cldn1O88551 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn1O88551 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn1O88551 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.65■□□□□ 0.58
Cldn1O88551 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn1O88551 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn1O88551 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn1O88551 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn1O88551 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn1O88551 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn1O88551 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn1O88551 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn1O88551 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn1O88551 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn1O88551 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn1O88551 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn1O88551 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cldn1O88551 Gm13241-201ENSMUST00000094493 780 ntBASIC18.63■□□□□ 0.57
Cldn1O88551 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn1O88551 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn1O88551 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cldn1O88551 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn1O88551 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.62■□□□□ 0.57
Cldn1O88551 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.62■□□□□ 0.57
Cldn1O88551 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn1O88551 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cldn1O88551 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn1O88551 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn1O88551 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn1O88551 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.61■□□□□ 0.57
Cldn1O88551 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn1O88551 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Cldn1O88551 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cldn1O88551 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn1O88551 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cldn1O88551 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.6■□□□□ 0.57
Cldn1O88551 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cldn1O88551 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Cldn1O88551 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn1O88551 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.59■□□□□ 0.57
Cldn1O88551 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn1O88551 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn1O88551 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cldn1O88551 Gm21956-201ENSMUST00000179946 522 ntBASIC18.58■□□□□ 0.56
Cldn1O88551 Gm7417-201ENSMUST00000192950 473 ntBASIC18.58■□□□□ 0.56
Cldn1O88551 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn1O88551 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms