Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Ubr1O70481 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ubr1O70481 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ubr1O70481 Nsd1-206ENSMUST00000224918 1001 ntBASIC29.37■■■□□ 2.29
Ubr1O70481 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Ubr1O70481 AC117245.4-201ENSMUST00000217388 1646 ntBASIC29.37■■■□□ 2.29
Ubr1O70481 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ubr1O70481 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ubr1O70481 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ubr1O70481 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ubr1O70481 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ubr1O70481 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Ubr1O70481 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC29.34■■■□□ 2.29
Ubr1O70481 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC29.34■■■□□ 2.29
Ubr1O70481 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ubr1O70481 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ubr1O70481 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
Ubr1O70481 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC29.33■■■□□ 2.29
Ubr1O70481 Gm5131-201ENSMUST00000212776 1238 ntBASIC29.33■■■□□ 2.29
Ubr1O70481 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ubr1O70481 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC29.32■■■□□ 2.28
Ubr1O70481 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
Ubr1O70481 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ubr1O70481 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Ubr1O70481 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr1O70481 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr1O70481 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr1O70481 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC29.31■■■□□ 2.28
Ubr1O70481 AC153524.1-201ENSMUST00000220436 1935 ntBASIC29.31■■■□□ 2.28
Ubr1O70481 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr1O70481 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
Ubr1O70481 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ubr1O70481 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Ubr1O70481 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ubr1O70481 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ubr1O70481 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ubr1O70481 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ubr1O70481 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ubr1O70481 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ubr1O70481 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ubr1O70481 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubr1O70481 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC29.27■■■□□ 2.28
Ubr1O70481 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubr1O70481 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubr1O70481 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
Ubr1O70481 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Ubr1O70481 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ubr1O70481 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ubr1O70481 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Ubr1O70481 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr1O70481 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC29.25■■■□□ 2.27
Ubr1O70481 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr1O70481 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr1O70481 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Ubr1O70481 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC29.24■■■□□ 2.27
Ubr1O70481 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Ubr1O70481 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ubr1O70481 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC29.24■■■□□ 2.27
Ubr1O70481 Gm42699-201ENSMUST00000198104 1657 ntBASIC29.24■■■□□ 2.27
Ubr1O70481 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ubr1O70481 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC29.23■■■□□ 2.27
Ubr1O70481 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Ubr1O70481 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr1O70481 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr1O70481 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr1O70481 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr1O70481 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr1O70481 Gm16464-201ENSMUST00000117815 1095 ntBASIC29.21■■■□□ 2.27
Ubr1O70481 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr1O70481 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr1O70481 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC29.21■■■□□ 2.27
Ubr1O70481 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr1O70481 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr1O70481 Gm15039-201ENSMUST00000118914 875 ntBASIC29.21■■■□□ 2.27
Ubr1O70481 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr1O70481 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ubr1O70481 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC29.21■■■□□ 2.27
Ubr1O70481 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC29.21■■■□□ 2.27
Ubr1O70481 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
Ubr1O70481 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ubr1O70481 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr1O70481 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr1O70481 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC29.19■■■□□ 2.26
Ubr1O70481 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr1O70481 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr1O70481 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr1O70481 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC29.18■■■□□ 2.26
Ubr1O70481 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr1O70481 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr1O70481 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr1O70481 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ubr1O70481 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC29.17■■■□□ 2.26
Ubr1O70481 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ubr1O70481 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Ubr1O70481 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ubr1O70481 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr1O70481 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr1O70481 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr1O70481 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr1O70481 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC29.14■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms