Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm2O35900 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Lsm2O35900 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm2O35900 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm2O35900 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm2O35900 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm2O35900 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm2O35900 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Lsm2O35900 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm2O35900 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.59■□□□□ 0.73
Lsm2O35900 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Lsm2O35900 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm2O35900 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.58■□□□□ 0.72
Lsm2O35900 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Lsm2O35900 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.57■□□□□ 0.72
Lsm2O35900 Nkain2-201ENSMUST00000092602 558 ntBASIC19.57■□□□□ 0.72
Lsm2O35900 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm2O35900 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Lsm2O35900 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm2O35900 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lsm2O35900 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm2O35900 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Lsm2O35900 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm2O35900 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
Lsm2O35900 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm2O35900 Notumos-201ENSMUST00000151998 2659 ntBASIC19.54■□□□□ 0.72
Lsm2O35900 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm2O35900 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm2O35900 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm2O35900 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm2O35900 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm2O35900 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm2O35900 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm2O35900 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lsm2O35900 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm2O35900 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm2O35900 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.52■□□□□ 0.72
Lsm2O35900 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.52■□□□□ 0.72
Lsm2O35900 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm2O35900 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm2O35900 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm2O35900 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Lsm2O35900 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Lsm2O35900 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.51■□□□□ 0.71
Lsm2O35900 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.51■□□□□ 0.71
Lsm2O35900 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm2O35900 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lsm2O35900 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.5■□□□□ 0.71
Lsm2O35900 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm2O35900 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm2O35900 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm2O35900 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm2O35900 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm2O35900 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.48■□□□□ 0.71
Lsm2O35900 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm2O35900 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lsm2O35900 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.48■□□□□ 0.71
Lsm2O35900 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm2O35900 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm2O35900 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Lsm2O35900 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm2O35900 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm2O35900 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm2O35900 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm2O35900 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm2O35900 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lsm2O35900 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.46■□□□□ 0.71
Lsm2O35900 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lsm2O35900 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm2O35900 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lsm2O35900 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm2O35900 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm2O35900 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm2O35900 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.44■□□□□ 0.7
Lsm2O35900 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsm2O35900 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.44■□□□□ 0.7
Lsm2O35900 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm2O35900 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lsm2O35900 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm2O35900 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm2O35900 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 153.9 ms