Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx8O35652 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lhx8O35652 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lhx8O35652 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.04■□□□□ 0.96
Lhx8O35652 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lhx8O35652 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.03■□□□□ 0.96
Lhx8O35652 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.03■□□□□ 0.96
Lhx8O35652 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx8O35652 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx8O35652 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx8O35652 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx8O35652 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.02■□□□□ 0.96
Lhx8O35652 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx8O35652 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx8O35652 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx8O35652 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Lhx8O35652 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx8O35652 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.01■□□□□ 0.95
Lhx8O35652 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lhx8O35652 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21■□□□□ 0.95
Lhx8O35652 Gm43416-201ENSMUST00000201916 1015 ntBASIC21■□□□□ 0.95
Lhx8O35652 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx8O35652 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lhx8O35652 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lhx8O35652 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.99■□□□□ 0.95
Lhx8O35652 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx8O35652 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.99■□□□□ 0.95
Lhx8O35652 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx8O35652 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.99■□□□□ 0.95
Lhx8O35652 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx8O35652 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx8O35652 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx8O35652 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx8O35652 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx8O35652 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx8O35652 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.98■□□□□ 0.95
Lhx8O35652 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Lhx8O35652 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx8O35652 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx8O35652 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx8O35652 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx8O35652 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.97■□□□□ 0.95
Lhx8O35652 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx8O35652 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx8O35652 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.96■□□□□ 0.95
Lhx8O35652 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx8O35652 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx8O35652 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx8O35652 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx8O35652 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.95■□□□□ 0.94
Lhx8O35652 Gm14523-201ENSMUST00000117260 558 ntBASIC20.94■□□□□ 0.94
Lhx8O35652 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Lhx8O35652 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx8O35652 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lhx8O35652 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx8O35652 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx8O35652 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Lhx8O35652 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx8O35652 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.92■□□□□ 0.94
Lhx8O35652 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.92■□□□□ 0.94
Lhx8O35652 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx8O35652 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx8O35652 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.92■□□□□ 0.94
Lhx8O35652 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lhx8O35652 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx8O35652 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx8O35652 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Lhx8O35652 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Lhx8O35652 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.91■□□□□ 0.94
Lhx8O35652 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx8O35652 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx8O35652 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.9■□□□□ 0.94
Lhx8O35652 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lhx8O35652 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.9■□□□□ 0.94
Lhx8O35652 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx8O35652 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.9■□□□□ 0.94
Lhx8O35652 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms