Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfsf11O35235 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf11O35235 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Tnfsf11O35235 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfsf11O35235 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.06■□□□□ 0.32
Tnfsf11O35235 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsf11O35235 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf11O35235 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf11O35235 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf11O35235 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.04■□□□□ 0.32
Tnfsf11O35235 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf11O35235 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf11O35235 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf11O35235 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tnfsf11O35235 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf11O35235 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf11O35235 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf11O35235 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf11O35235 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tnfsf11O35235 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.02■□□□□ 0.31
Tnfsf11O35235 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.02■□□□□ 0.31
Tnfsf11O35235 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfsf11O35235 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tnfsf11O35235 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tnfsf11O35235 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsf11O35235 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsf11O35235 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsf11O35235 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfsf11O35235 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tnfsf11O35235 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.99■□□□□ 0.31
Tnfsf11O35235 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Gm37136-201ENSMUST00000194368 194 ntBASIC16.99■□□□□ 0.31
Tnfsf11O35235 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfsf11O35235 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfsf11O35235 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfsf11O35235 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfsf11O35235 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfsf11O35235 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Tnfsf11O35235 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfsf11O35235 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfsf11O35235 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfsf11O35235 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfsf11O35235 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.96■□□□□ 0.31
Tnfsf11O35235 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfsf11O35235 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfsf11O35235 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfsf11O35235 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.96■□□□□ 0.3
Tnfsf11O35235 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.96■□□□□ 0.3
Tnfsf11O35235 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfsf11O35235 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf11O35235 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf11O35235 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf11O35235 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf11O35235 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf11O35235 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.94■□□□□ 0.3
Tnfsf11O35235 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms