Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm18755-201ENSMUST00000218030 1099 ntBASIC27.11■■□□□ 1.93
Trim34bJ3QNR8 Rps24-207ENSMUST00000224568 714 ntBASIC27.11■■□□□ 1.93
Trim34bJ3QNR8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Trim34bJ3QNR8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.1■■□□□ 1.93
Trim34bJ3QNR8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Trim34bJ3QNR8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim34bJ3QNR8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim34bJ3QNR8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Trim34bJ3QNR8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.09■■□□□ 1.93
Trim34bJ3QNR8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim34bJ3QNR8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trim34bJ3QNR8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trim34bJ3QNR8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Trim34bJ3QNR8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Trim34bJ3QNR8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trim34bJ3QNR8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim34bJ3QNR8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim34bJ3QNR8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim34bJ3QNR8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim34bJ3QNR8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim34bJ3QNR8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim34bJ3QNR8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim34bJ3QNR8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim34bJ3QNR8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim34bJ3QNR8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Trim34bJ3QNR8 Gm10232-201ENSMUST00000089221 720 ntBASIC27.03■■□□□ 1.92
Trim34bJ3QNR8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Trim34bJ3QNR8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim34bJ3QNR8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.02■■□□□ 1.92
Trim34bJ3QNR8 Gm45102-201ENSMUST00000207427 857 ntBASIC27.02■■□□□ 1.92
Trim34bJ3QNR8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim34bJ3QNR8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.02■■□□□ 1.92
Trim34bJ3QNR8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC27.01■■□□□ 1.91
Trim34bJ3QNR8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC27.01■■□□□ 1.91
Trim34bJ3QNR8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trim34bJ3QNR8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trim34bJ3QNR8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27■■□□□ 1.91
Trim34bJ3QNR8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trim34bJ3QNR8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trim34bJ3QNR8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27■■□□□ 1.91
Trim34bJ3QNR8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Trim34bJ3QNR8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Trim34bJ3QNR8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim34bJ3QNR8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Trim34bJ3QNR8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim34bJ3QNR8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim34bJ3QNR8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim34bJ3QNR8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim34bJ3QNR8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.97■■□□□ 1.91
Trim34bJ3QNR8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim34bJ3QNR8 Gm14117-201ENSMUST00000122417 843 ntBASIC26.97■■□□□ 1.91
Trim34bJ3QNR8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.97■■□□□ 1.91
Trim34bJ3QNR8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Trim34bJ3QNR8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Trim34bJ3QNR8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim34bJ3QNR8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Trim34bJ3QNR8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Trim34bJ3QNR8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trim34bJ3QNR8 Gm9959-201ENSMUST00000068277 390 ntBASIC26.95■■□□□ 1.9
Trim34bJ3QNR8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trim34bJ3QNR8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Trim34bJ3QNR8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Trim34bJ3QNR8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34bJ3QNR8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34bJ3QNR8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34bJ3QNR8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trim34bJ3QNR8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34bJ3QNR8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34bJ3QNR8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Trim34bJ3QNR8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34bJ3QNR8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim34bJ3QNR8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.92■■□□□ 1.9
Trim34bJ3QNR8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
Trim34bJ3QNR8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.91■■□□□ 1.9
Trim34bJ3QNR8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34bJ3QNR8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34bJ3QNR8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34bJ3QNR8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34bJ3QNR8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34bJ3QNR8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.89■■□□□ 1.9
Trim34bJ3QNR8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim34bJ3QNR8 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.89■■□□□ 1.9
Trim34bJ3QNR8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim34bJ3QNR8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Trim34bJ3QNR8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim34bJ3QNR8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.88■■□□□ 1.89
Trim34bJ3QNR8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms