Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav13d-3J3QMG8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 Mir6538-201ENSMUST00000183713 110 ntBASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav13d-3J3QMG8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav13d-3J3QMG8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav13d-3J3QMG8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav13d-3J3QMG8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trav13d-3J3QMG8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav13d-3J3QMG8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.26■□□□□ 0.67
Trav13d-3J3QMG8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trav13d-3J3QMG8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav13d-3J3QMG8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Gm22567-201ENSMUST00000175542 342 ntBASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trav13d-3J3QMG8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Gm14523-201ENSMUST00000117260 558 ntBASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav13d-3J3QMG8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav13d-3J3QMG8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13d-3J3QMG8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13d-3J3QMG8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav13d-3J3QMG8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav13d-3J3QMG8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Trav13d-3J3QMG8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav13d-3J3QMG8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav13d-3J3QMG8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav13d-3J3QMG8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav13d-3J3QMG8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav13d-3J3QMG8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav13d-3J3QMG8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav13d-3J3QMG8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav13d-3J3QMG8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.18■□□□□ 0.66
Trav13d-3J3QMG8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Gm12366-201ENSMUST00000121722 873 ntBASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav13d-3J3QMG8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms