Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Zc3h13E9Q784 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Zc3h13E9Q784 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC31.31■■■□□ 2.6
Zc3h13E9Q784 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Zc3h13E9Q784 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Zc3h13E9Q784 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
Zc3h13E9Q784 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
Zc3h13E9Q784 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Zc3h13E9Q784 Gm22238-201ENSMUST00000175222 88 ntBASIC31.3■■■□□ 2.6
Zc3h13E9Q784 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Zc3h13E9Q784 AC164433.2-201ENSMUST00000226346 1701 ntBASIC31.3■■■□□ 2.6
Zc3h13E9Q784 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.29■■■□□ 2.6
Zc3h13E9Q784 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Zc3h13E9Q784 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Zc3h13E9Q784 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Zc3h13E9Q784 Gm7417-201ENSMUST00000192950 473 ntBASIC31.28■■■□□ 2.6
Zc3h13E9Q784 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.28■■■□□ 2.6
Zc3h13E9Q784 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.28■■■□□ 2.6
Zc3h13E9Q784 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.27■■■□□ 2.6
Zc3h13E9Q784 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.26■■■□□ 2.59
Zc3h13E9Q784 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Zc3h13E9Q784 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Zc3h13E9Q784 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zc3h13E9Q784 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Zc3h13E9Q784 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Zc3h13E9Q784 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zc3h13E9Q784 Gm27454-201ENSMUST00000185090 204 ntBASIC31.24■■■□□ 2.59
Zc3h13E9Q784 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Zc3h13E9Q784 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Zc3h13E9Q784 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Zc3h13E9Q784 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
Zc3h13E9Q784 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Zc3h13E9Q784 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Zc3h13E9Q784 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC31.22■■■□□ 2.59
Zc3h13E9Q784 Gm16464-201ENSMUST00000117815 1095 ntBASIC31.22■■■□□ 2.59
Zc3h13E9Q784 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Zc3h13E9Q784 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Zc3h13E9Q784 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
Zc3h13E9Q784 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Zc3h13E9Q784 Gm12922-201ENSMUST00000120626 809 ntBASIC31.2■■■□□ 2.58
Zc3h13E9Q784 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Zc3h13E9Q784 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Zc3h13E9Q784 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Zc3h13E9Q784 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Zc3h13E9Q784 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC31.18■■■□□ 2.58
Zc3h13E9Q784 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Zc3h13E9Q784 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Zc3h13E9Q784 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.17■■■□□ 2.58
Zc3h13E9Q784 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Zc3h13E9Q784 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.16■■■□□ 2.58
Zc3h13E9Q784 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Gm45417-201ENSMUST00000209533 758 ntBASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Zc3h13E9Q784 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Zc3h13E9Q784 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Zc3h13E9Q784 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Zc3h13E9Q784 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Zc3h13E9Q784 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Zc3h13E9Q784 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.13■■■□□ 2.57
Zc3h13E9Q784 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Gm12821-201ENSMUST00000120022 600 ntBASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Zc3h13E9Q784 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC31.12■■■□□ 2.57
Zc3h13E9Q784 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.11■■■□□ 2.57
Zc3h13E9Q784 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Zc3h13E9Q784 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Zc3h13E9Q784 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Zc3h13E9Q784 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Zc3h13E9Q784 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Zc3h13E9Q784 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Zc3h13E9Q784 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Zc3h13E9Q784 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Zc3h13E9Q784 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Zc3h13E9Q784 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Zc3h13E9Q784 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Zc3h13E9Q784 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.08■■■□□ 2.57
Zc3h13E9Q784 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.57
Zc3h13E9Q784 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC31.07■■■□□ 2.56
Zc3h13E9Q784 Flvcr1-202ENSMUST00000191946 1216 ntBASIC31.07■■■□□ 2.56
Zc3h13E9Q784 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Zc3h13E9Q784 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Zc3h13E9Q784 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Zc3h13E9Q784 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms