Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Gm10849-201ENSMUST00000100397 618 ntBASIC11.06□□□□□ -0.64
Rnf213E9Q555 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.06□□□□□ -0.64
Rnf213E9Q555 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf213E9Q555 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC11.05□□□□□ -0.64
Rnf213E9Q555 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.05□□□□□ -0.64
Rnf213E9Q555 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf213E9Q555 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.04□□□□□ -0.64
Rnf213E9Q555 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf213E9Q555 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.04□□□□□ -0.64
Rnf213E9Q555 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf213E9Q555 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf213E9Q555 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC11.02□□□□□ -0.64
Rnf213E9Q555 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf213E9Q555 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf213E9Q555 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rnf213E9Q555 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Gm28731-201ENSMUST00000185564 1569 ntBASIC11.01□□□□□ -0.65
Rnf213E9Q555 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf213E9Q555 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC11□□□□□ -0.65
Rnf213E9Q555 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11□□□□□ -0.65
Rnf213E9Q555 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11□□□□□ -0.65
Rnf213E9Q555 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf213E9Q555 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.99□□□□□ -0.65
Rnf213E9Q555 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf213E9Q555 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms