Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc71lE9Q4T4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc71lE9Q4T4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc71lE9Q4T4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc71lE9Q4T4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc71lE9Q4T4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc71lE9Q4T4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc71lE9Q4T4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc71lE9Q4T4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71lE9Q4T4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc71lE9Q4T4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71lE9Q4T4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc71lE9Q4T4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71lE9Q4T4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71lE9Q4T4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71lE9Q4T4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71lE9Q4T4 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.08■□□□□ 0.33
Ccdc71lE9Q4T4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71lE9Q4T4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71lE9Q4T4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc71lE9Q4T4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc71lE9Q4T4 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.08■□□□□ 0.32
Ccdc71lE9Q4T4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc71lE9Q4T4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71lE9Q4T4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ccdc71lE9Q4T4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc71lE9Q4T4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71lE9Q4T4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc71lE9Q4T4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc71lE9Q4T4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc71lE9Q4T4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc71lE9Q4T4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc71lE9Q4T4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc71lE9Q4T4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71lE9Q4T4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc71lE9Q4T4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc71lE9Q4T4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ccdc71lE9Q4T4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms