Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh17E9PXF0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh17E9PXF0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh17E9PXF0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh17E9PXF0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdh17E9PXF0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh17E9PXF0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh17E9PXF0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh17E9PXF0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.28■□□□□ 0.84
Pcdh17E9PXF0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh17E9PXF0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh17E9PXF0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh17E9PXF0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh17E9PXF0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh17E9PXF0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh17E9PXF0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh17E9PXF0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh17E9PXF0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh17E9PXF0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh17E9PXF0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Rps24-207ENSMUST00000224568 714 ntBASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh17E9PXF0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdh17E9PXF0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms