Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank1D3YZU1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Shank1D3YZU1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shank1D3YZU1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.74■□□□□ 0.75
Shank1D3YZU1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.74■□□□□ 0.75
Shank1D3YZU1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.74■□□□□ 0.75
Shank1D3YZU1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.74■□□□□ 0.75
Shank1D3YZU1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Gm12922-201ENSMUST00000120626 809 ntBASIC19.73■□□□□ 0.75
Shank1D3YZU1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.73■□□□□ 0.75
Shank1D3YZU1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.73■□□□□ 0.75
Shank1D3YZU1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank1D3YZU1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shank1D3YZU1 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.72■□□□□ 0.75
Shank1D3YZU1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank1D3YZU1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.71■□□□□ 0.75
Shank1D3YZU1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shank1D3YZU1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.71■□□□□ 0.75
Shank1D3YZU1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.71■□□□□ 0.75
Shank1D3YZU1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Shank1D3YZU1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shank1D3YZU1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank1D3YZU1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank1D3YZU1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shank1D3YZU1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Shank1D3YZU1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.7■□□□□ 0.74
Shank1D3YZU1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank1D3YZU1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Shank1D3YZU1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shank1D3YZU1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank1D3YZU1 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.69■□□□□ 0.74
Shank1D3YZU1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shank1D3YZU1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank1D3YZU1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shank1D3YZU1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shank1D3YZU1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.67■□□□□ 0.74
Shank1D3YZU1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.67■□□□□ 0.74
Shank1D3YZU1 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.67■□□□□ 0.74
Shank1D3YZU1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shank1D3YZU1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shank1D3YZU1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Shank1D3YZU1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shank1D3YZU1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shank1D3YZU1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.65■□□□□ 0.74
Shank1D3YZU1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shank1D3YZU1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank1D3YZU1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shank1D3YZU1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shank1D3YZU1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.64■□□□□ 0.73
Shank1D3YZU1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Gm27454-201ENSMUST00000185090 204 ntBASIC19.63■□□□□ 0.73
Shank1D3YZU1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Shank1D3YZU1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Shank1D3YZU1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank1D3YZU1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.62■□□□□ 0.73
Shank1D3YZU1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank1D3YZU1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank1D3YZU1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Shank1D3YZU1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.62■□□□□ 0.73
Shank1D3YZU1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank1D3YZU1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank1D3YZU1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank1D3YZU1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.61■□□□□ 0.73
Shank1D3YZU1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank1D3YZU1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.61■□□□□ 0.73
Shank1D3YZU1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank1D3YZU1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank1D3YZU1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank1D3YZU1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank1D3YZU1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank1D3YZU1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.6■□□□□ 0.73
Shank1D3YZU1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Shank1D3YZU1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank1D3YZU1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank1D3YZU1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms