Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 Gm6821-201ENSMUST00000107540 542 ntBASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 Gm9812-201ENSMUST00000061934 968 ntBASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 Gm4799-201ENSMUST00000095396 657 ntBASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-1A0N8R0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-1A0N8R0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trav12d-1A0N8R0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-1A0N8R0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-1A0N8R0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12d-1A0N8R0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12d-1A0N8R0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12d-1A0N8R0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.59■□□□□ 0.41
Trav12d-1A0N8R0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trav12d-1A0N8R0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12d-1A0N8R0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav12d-1A0N8R0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trav12d-1A0N8R0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.58■□□□□ 0.41
Trav12d-1A0N8R0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12d-1A0N8R0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav12d-1A0N8R0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12d-1A0N8R0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12d-1A0N8R0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav12d-1A0N8R0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trav12d-1A0N8R0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12d-1A0N8R0 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.57■□□□□ 0.4
Trav12d-1A0N8R0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-1A0N8R0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-1A0N8R0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12d-1A0N8R0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav12d-1A0N8R0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12d-1A0N8R0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12d-1A0N8R0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav12d-1A0N8R0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.53■□□□□ 0.4
Trav12d-1A0N8R0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Mir3960-201ENSMUST00000198213 73 ntBASIC17.52■□□□□ 0.4
Trav12d-1A0N8R0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms