Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Notumos-201ENSMUST00000151998 2659 ntBASIC19.63■□□□□ 0.73
Pcdhgb8A0A140LI48 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb8A0A140LI48 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb8A0A140LI48 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb8A0A140LI48 Gm45364-201ENSMUST00000210883 159 ntBASIC19.62■□□□□ 0.73
Pcdhgb8A0A140LI48 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb8A0A140LI48 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb8A0A140LI48 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb8A0A140LI48 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb8A0A140LI48 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb8A0A140LI48 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb8A0A140LI48 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb8A0A140LI48 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhgb8A0A140LI48 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhgb8A0A140LI48 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Gm9806-201ENSMUST00000051080 552 ntBASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhgb8A0A140LI48 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb8A0A140LI48 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhgb8A0A140LI48 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb8A0A140LI48 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb8A0A140LI48 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb8A0A140LI48 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb8A0A140LI48 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgb8A0A140LI48 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Pcdhgb8A0A140LI48 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
Pcdhgb8A0A140LI48 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
Pcdhgb8A0A140LI48 Gm11687-201ENSMUST00000118911 886 ntBASIC19.58■□□□□ 0.72
Pcdhgb8A0A140LI48 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb8A0A140LI48 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb8A0A140LI48 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb8A0A140LI48 Scarna2-201ENSMUST00000157560 414 ntBASIC19.57■□□□□ 0.72
Pcdhgb8A0A140LI48 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb8A0A140LI48 Gm9812-201ENSMUST00000061934 968 ntBASIC19.57■□□□□ 0.72
Pcdhgb8A0A140LI48 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb8A0A140LI48 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb8A0A140LI48 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb8A0A140LI48 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb8A0A140LI48 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb8A0A140LI48 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb8A0A140LI48 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb8A0A140LI48 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb8A0A140LI48 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb8A0A140LI48 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb8A0A140LI48 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Cap2-205ENSMUST00000225824 1634 ntBASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb8A0A140LI48 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb8A0A140LI48 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms