Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-4A0A0G2JFX3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-4A0A0G2JFX3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav13d-4A0A0G2JFX3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-4A0A0G2JFX3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.02■□□□□ -0
Trav13d-4A0A0G2JFX3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-4A0A0G2JFX3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13d-4A0A0G2JFX3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Gm4799-201ENSMUST00000095396 657 ntBASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-4A0A0G2JFX3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav13d-4A0A0G2JFX3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-4A0A0G2JFX3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.92□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms