Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13n-2A0A0G2JF93 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13n-2A0A0G2JF93 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-2A0A0G2JF93 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13n-2A0A0G2JF93 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-2A0A0G2JF93 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav13n-2A0A0G2JF93 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-2A0A0G2JF93 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-2A0A0G2JF93 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-2A0A0G2JF93 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13n-2A0A0G2JF93 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-2A0A0G2JF93 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-2A0A0G2JF93 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-2A0A0G2JF93 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-2A0A0G2JF93 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-2A0A0G2JF93 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-2A0A0G2JF93 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav13n-2A0A0G2JF93 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav13n-2A0A0G2JF93 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-2A0A0G2JF93 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Trav13n-2A0A0G2JF93 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav13n-2A0A0G2JF93 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-2A0A0G2JF93 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms