Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv19A0A0B4J1H4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv19A0A0B4J1H4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv19A0A0B4J1H4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv19A0A0B4J1H4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Trbv19A0A0B4J1H4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv19A0A0B4J1H4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trbv19A0A0B4J1H4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv19A0A0B4J1H4 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.57■□□□□ 0.4
Trbv19A0A0B4J1H4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv19A0A0B4J1H4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trbv19A0A0B4J1H4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv19A0A0B4J1H4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv19A0A0B4J1H4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv19A0A0B4J1H4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv19A0A0B4J1H4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv19A0A0B4J1H4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv19A0A0B4J1H4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Gm6311-201ENSMUST00000073790 878 ntBASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv19A0A0B4J1H4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv19A0A0B4J1H4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trbv19A0A0B4J1H4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv19A0A0B4J1H4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.53■□□□□ 0.4
Trbv19A0A0B4J1H4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv19A0A0B4J1H4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv19A0A0B4J1H4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv19A0A0B4J1H4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv19A0A0B4J1H4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv19A0A0B4J1H4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv19A0A0B4J1H4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv19A0A0B4J1H4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.51■□□□□ 0.39
Trbv19A0A0B4J1H4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv19A0A0B4J1H4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv19A0A0B4J1H4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv19A0A0B4J1H4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trbv19A0A0B4J1H4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv19A0A0B4J1H4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.49■□□□□ 0.39
Trbv19A0A0B4J1H4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv19A0A0B4J1H4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv19A0A0B4J1H4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv19A0A0B4J1H4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Gm22567-201ENSMUST00000175542 342 ntBASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv19A0A0B4J1H4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv19A0A0B4J1H4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Trbv19A0A0B4J1H4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.47■□□□□ 0.39
Trbv19A0A0B4J1H4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv19A0A0B4J1H4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv19A0A0B4J1H4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv19A0A0B4J1H4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trbv19A0A0B4J1H4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms