Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cap2-205ENSMUST00000225824 1634 ntBASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.55■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.52■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trbv12-1A0A0B4J1H0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Gm10420-201ENSMUST00000121713 882 ntBASIC19.5■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.5■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.48■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.48■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.47■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv12-1A0A0B4J1H0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.45■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv12-1A0A0B4J1H0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.41■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv12-1A0A0B4J1H0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv12-1A0A0B4J1H0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trbv12-1A0A0B4J1H0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms