Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighv1-47A0A0A6YY41 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighv1-47A0A0A6YY41 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-47A0A0A6YY41 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-47A0A0A6YY41 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-47A0A0A6YY41 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-47A0A0A6YY41 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-47A0A0A6YY41 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-47A0A0A6YY41 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-47A0A0A6YY41 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-47A0A0A6YY41 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-47A0A0A6YY41 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-47A0A0A6YY41 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-47A0A0A6YY41 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.99■□□□□ 0.47
Ighv1-47A0A0A6YY41 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-47A0A0A6YY41 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-47A0A0A6YY41 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-47A0A0A6YY41 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-47A0A0A6YY41 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-47A0A0A6YY41 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-47A0A0A6YY41 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.96■□□□□ 0.47
Ighv1-47A0A0A6YY41 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.96■□□□□ 0.47
Ighv1-47A0A0A6YY41 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-47A0A0A6YY41 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.96■□□□□ 0.47
Ighv1-47A0A0A6YY41 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms