Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav6d-5A0A075B6B9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-5A0A075B6B9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-5A0A075B6B9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-5A0A075B6B9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Trav6d-5A0A075B6B9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-5A0A075B6B9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.74■□□□□ 0.43
Trav6d-5A0A075B6B9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-5A0A075B6B9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-5A0A075B6B9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-5A0A075B6B9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.73■□□□□ 0.43
Trav6d-5A0A075B6B9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-5A0A075B6B9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.73■□□□□ 0.43
Trav6d-5A0A075B6B9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Nkain2-201ENSMUST00000092602 558 ntBASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6d-5A0A075B6B9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav6d-5A0A075B6B9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6d-5A0A075B6B9 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.71■□□□□ 0.43
Trav6d-5A0A075B6B9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6d-5A0A075B6B9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6d-5A0A075B6B9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-5A0A075B6B9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-5A0A075B6B9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-5A0A075B6B9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-5A0A075B6B9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.7■□□□□ 0.42
Trav6d-5A0A075B6B9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-5A0A075B6B9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav6d-5A0A075B6B9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6d-5A0A075B6B9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6d-5A0A075B6B9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav6d-5A0A075B6B9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6d-5A0A075B6B9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6d-5A0A075B6B9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav6d-5A0A075B6B9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav6d-5A0A075B6B9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav6d-5A0A075B6B9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-5A0A075B6B9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-5A0A075B6B9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav6d-5A0A075B6B9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-5A0A075B6B9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-5A0A075B6B9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-5A0A075B6B9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6d-5A0A075B6B9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav6d-5A0A075B6B9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6d-5A0A075B6B9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6d-5A0A075B6B9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-5A0A075B6B9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-5A0A075B6B9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-5A0A075B6B9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-5A0A075B6B9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-5A0A075B6B9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6d-5A0A075B6B9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav6d-5A0A075B6B9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trav6d-5A0A075B6B9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav6d-5A0A075B6B9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav6d-5A0A075B6B9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trav6d-5A0A075B6B9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms