Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav16A0A075B653 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav16A0A075B653 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trav16A0A075B653 Gm37136-201ENSMUST00000194368 194 ntBASIC16.87■□□□□ 0.29
Trav16A0A075B653 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav16A0A075B653 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav16A0A075B653 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav16A0A075B653 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav16A0A075B653 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav16A0A075B653 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav16A0A075B653 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav16A0A075B653 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav16A0A075B653 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav16A0A075B653 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav16A0A075B653 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav16A0A075B653 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16A0A075B653 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav16A0A075B653 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16A0A075B653 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16A0A075B653 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16A0A075B653 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16A0A075B653 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16A0A075B653 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav16A0A075B653 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16A0A075B653 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16A0A075B653 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16A0A075B653 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16A0A075B653 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav16A0A075B653 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16A0A075B653 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16A0A075B653 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16A0A075B653 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16A0A075B653 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16A0A075B653 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16A0A075B653 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16A0A075B653 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav16A0A075B653 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16A0A075B653 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav16A0A075B653 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav16A0A075B653 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav16A0A075B653 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16A0A075B653 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav16A0A075B653 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16A0A075B653 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav16A0A075B653 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16A0A075B653 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav16A0A075B653 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16A0A075B653 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.78■□□□□ 0.28
Trav16A0A075B653 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16A0A075B653 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav16A0A075B653 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav16A0A075B653 Nkain2-201ENSMUST00000092602 558 ntBASIC16.77■□□□□ 0.28
Trav16A0A075B653 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16A0A075B653 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav16A0A075B653 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16A0A075B653 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16A0A075B653 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16A0A075B653 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16A0A075B653 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav16A0A075B653 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms