Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-1A0A075B644 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-1A0A075B644 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-1A0A075B644 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav13-1A0A075B644 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-1A0A075B644 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-1A0A075B644 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav13-1A0A075B644 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13-1A0A075B644 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13-1A0A075B644 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13-1A0A075B644 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-1A0A075B644 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-1A0A075B644 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13-1A0A075B644 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-1A0A075B644 Gm5921-201ENSMUST00000075898 882 ntBASIC15.42■□□□□ 0.06
Trav13-1A0A075B644 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-1A0A075B644 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav13-1A0A075B644 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-1A0A075B644 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-1A0A075B644 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-1A0A075B644 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-1A0A075B644 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-1A0A075B644 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13-1A0A075B644 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav13-1A0A075B644 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13-1A0A075B644 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav13-1A0A075B644 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-1A0A075B644 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13-1A0A075B644 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-1A0A075B644 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-1A0A075B644 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-1A0A075B644 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms