Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8-1A0A075B641 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8-1A0A075B641 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8-1A0A075B641 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8-1A0A075B641 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8-1A0A075B641 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8-1A0A075B641 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.65■□□□□ 0.1
Trav8-1A0A075B641 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trav8-1A0A075B641 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav8-1A0A075B641 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8-1A0A075B641 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav8-1A0A075B641 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav8-1A0A075B641 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trav8-1A0A075B641 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8-1A0A075B641 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav8-1A0A075B641 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8-1A0A075B641 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8-1A0A075B641 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav8-1A0A075B641 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8-1A0A075B641 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8-1A0A075B641 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8-1A0A075B641 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8-1A0A075B641 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8-1A0A075B641 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav8-1A0A075B641 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8-1A0A075B641 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Trav8-1A0A075B641 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8-1A0A075B641 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8-1A0A075B641 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8-1A0A075B641 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav8-1A0A075B641 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8-1A0A075B641 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8-1A0A075B641 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8-1A0A075B641 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8-1A0A075B641 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8-1A0A075B641 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trav8-1A0A075B641 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav8-1A0A075B641 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8-1A0A075B641 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms