Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.62■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.61■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.61■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.6■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gm6821-201ENSMUST00000107540 542 ntBASIC18.59■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gm4799-201ENSMUST00000095396 657 ntBASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.52■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.52■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav15d-1-dv6d-1A0A075B624 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm22567-201ENSMUST00000175542 342 ntBASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms