Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav13d-1A0A075B606 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13d-1A0A075B606 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Trav13d-1A0A075B606 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13d-1A0A075B606 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13d-1A0A075B606 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav13d-1A0A075B606 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-1A0A075B606 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Gm5921-201ENSMUST00000075898 882 ntBASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-1A0A075B606 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-1A0A075B606 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-1A0A075B606 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-1A0A075B606 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-1A0A075B606 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-1A0A075B606 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-1A0A075B606 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-1A0A075B606 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-1A0A075B606 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav13d-1A0A075B606 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-1A0A075B606 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-1A0A075B606 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-1A0A075B606 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-1A0A075B606 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-1A0A075B606 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-1A0A075B606 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-1A0A075B606 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-1A0A075B606 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav13d-1A0A075B606 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13d-1A0A075B606 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav13d-1A0A075B606 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav13d-1A0A075B606 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-1A0A075B606 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Trav13d-1A0A075B606 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-1A0A075B606 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-1A0A075B606 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav13d-1A0A075B606 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-1A0A075B606 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-1A0A075B606 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-1A0A075B606 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.84■□□□□ 0.13
Trav13d-1A0A075B606 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav13d-1A0A075B606 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-1A0A075B606 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms