Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav5-1A0A075B5Z7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.9■□□□□ 0.62
Trav5-1A0A075B5Z7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav5-1A0A075B5Z7 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.9■□□□□ 0.62
Trav5-1A0A075B5Z7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav5-1A0A075B5Z7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm45444-201ENSMUST00000211394 898 ntBASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5-1A0A075B5Z7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5-1A0A075B5Z7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5-1A0A075B5Z7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm43566-201ENSMUST00000196851 808 ntBASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5-1A0A075B5Z7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5-1A0A075B5Z7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5-1A0A075B5Z7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav5-1A0A075B5Z7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.83■□□□□ 0.6
Trav5-1A0A075B5Z7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5-1A0A075B5Z7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5-1A0A075B5Z7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav5-1A0A075B5Z7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav5-1A0A075B5Z7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
Trav5-1A0A075B5Z7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav5-1A0A075B5Z7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav5-1A0A075B5Z7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav5-1A0A075B5Z7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav5-1A0A075B5Z7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav5-1A0A075B5Z7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm22567-201ENSMUST00000175542 342 ntBASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Gm5812-201ENSMUST00000061073 957 ntBASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav5-1A0A075B5Z7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav5-1A0A075B5Z7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms