Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.97□□□□□ -0.65
PdfS4R2K0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.97□□□□□ -0.65
PdfS4R2K0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PdfS4R2K0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
PdfS4R2K0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
PdfS4R2K0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm4459-201ENSMUST00000118750 468 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm11452-201ENSMUST00000122376 690 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm43514-201ENSMUST00000198852 424 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.96□□□□□ -0.65
PdfS4R2K0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 Gm6296-201ENSMUST00000222599 943 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.96□□□□□ -0.65
PdfS4R2K0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.96□□□□□ -0.65
PdfS4R2K0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PdfS4R2K0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.96□□□□□ -0.66
PdfS4R2K0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.96□□□□□ -0.66
PdfS4R2K0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.66
PdfS4R2K0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.95□□□□□ -0.66
PdfS4R2K0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.95□□□□□ -0.66
PdfS4R2K0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.95□□□□□ -0.66
PdfS4R2K0 Gm10060-201ENSMUST00000212002 111 ntBASIC10.95□□□□□ -0.66
PdfS4R2K0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.95□□□□□ -0.66
PdfS4R2K0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PdfS4R2K0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms