Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClcnkaQ9WUB7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm18889-201ENSMUST00000174284 929 ntBASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm37935-201ENSMUST00000192012 982 ntBASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm37230-201ENSMUST00000194491 818 ntBASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClcnkaQ9WUB7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm2810-201ENSMUST00000118681 990 ntBASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Gm27702-201ENSMUST00000184512 56 ntBASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClcnkaQ9WUB7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms