Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clcf1Q9QZM3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Mir7023-201ENSMUST00000185093 64 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clcf1Q9QZM3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Gm27622-201ENSMUST00000183779 60 ntBASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clcf1Q9QZM3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms