Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a2Q9JLR1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm11745-201ENSMUST00000121669 448 ntBASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm2756-201ENSMUST00000195851 400 ntBASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm2451-201ENSMUST00000199447 999 ntBASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm10290-201ENSMUST00000200451 999 ntBASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a2Q9JLR1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a2Q9JLR1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms